Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.32■□□□□ 0.52
SMPD1P17405 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SMPD1P17405 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 AL391825.1-201ENST00000457671 1364 ntBASIC18.31■□□□□ 0.52
SMPD1P17405 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.31■□□□□ 0.52
SMPD1P17405 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SMPD1P17405 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SMPD1P17405 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.31■□□□□ 0.52
SMPD1P17405 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.31■□□□□ 0.52
SMPD1P17405 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
SMPD1P17405 AC087499.6-201ENST00000411576 835 ntBASIC18.31■□□□□ 0.52
SMPD1P17405 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.31■□□□□ 0.52
SMPD1P17405 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.31■□□□□ 0.52
SMPD1P17405 INE1-201ENST00000456273 945 ntBASIC18.31■□□□□ 0.52
SMPD1P17405 SERBP1P3-201ENST00000459980 809 ntBASIC18.31■□□□□ 0.52
SMPD1P17405 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.31■□□□□ 0.52
SMPD1P17405 AC093004.1-201ENST00000508850 424 ntBASIC18.31■□□□□ 0.52
SMPD1P17405 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 AC008494.3-201ENST00000606615 944 ntBASIC18.31■□□□□ 0.52
SMPD1P17405 AC026979.3-201ENST00000607315 403 ntBASIC18.31■□□□□ 0.52
SMPD1P17405 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.31■□□□□ 0.52
SMPD1P17405 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.31■□□□□ 0.52
SMPD1P17405 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.31■□□□□ 0.52
SMPD1P17405 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SMPD1P17405 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SMPD1P17405 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.31■□□□□ 0.52
SMPD1P17405 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SMPD1P17405 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.3■□□□□ 0.52
SMPD1P17405 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.3■□□□□ 0.52
SMPD1P17405 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SMPD1P17405 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SMPD1P17405 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SMPD1P17405 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 SRD5A3P1-201ENST00000603021 949 ntBASIC18.3■□□□□ 0.52
SMPD1P17405 AC004461.2-201ENST00000629517 803 ntBASIC18.3■□□□□ 0.52
SMPD1P17405 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SMPD1P17405 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.3■□□□□ 0.52
SMPD1P17405 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SMPD1P17405 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 AL603756.1-201ENST00000606511 2163 ntBASIC18.3■□□□□ 0.52
SMPD1P17405 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMPD1P17405 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.29■□□□□ 0.52
SMPD1P17405 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SMPD1P17405 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
SMPD1P17405 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.29■□□□□ 0.52
SMPD1P17405 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SMPD1P17405 ATP5G2P4-201ENST00000442175 420 ntBASIC18.29■□□□□ 0.52
SMPD1P17405 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.29■□□□□ 0.52
SMPD1P17405 GIMAP3P-201ENST00000495150 836 ntBASIC18.29■□□□□ 0.52
SMPD1P17405 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.29■□□□□ 0.52
SMPD1P17405 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.29■□□□□ 0.52
SMPD1P17405 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.29■□□□□ 0.52
SMPD1P17405 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.29■□□□□ 0.52
SMPD1P17405 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.29■□□□□ 0.52
SMPD1P17405 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.29■□□□□ 0.52
SMPD1P17405 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.29■□□□□ 0.52
SMPD1P17405 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SMPD1P17405 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SMPD1P17405 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMPD1P17405 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.29■□□□□ 0.52
SMPD1P17405 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms