Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TIMP1P01033 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TIMP1P01033 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 AC004945.1-201ENST00000416738 983 ntBASIC17.72■□□□□ 0.43
TIMP1P01033 AL162726.2-201ENST00000438986 1017 ntBASIC17.72■□□□□ 0.43
TIMP1P01033 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.72■□□□□ 0.43
TIMP1P01033 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.72■□□□□ 0.43
TIMP1P01033 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.72■□□□□ 0.43
TIMP1P01033 AL139011.1-202ENST00000642063 584 ntBASIC17.72■□□□□ 0.43
TIMP1P01033 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TIMP1P01033 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TIMP1P01033 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMP1P01033 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
TIMP1P01033 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMP1P01033 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TIMP1P01033 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMP1P01033 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 HIST3H2BA-201ENST00000436555 524 ntBASIC17.71■□□□□ 0.43
TIMP1P01033 FO681548.1-201ENST00000455617 1132 ntBASIC17.71■□□□□ 0.43
TIMP1P01033 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TIMP1P01033 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TIMP1P01033 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMP1P01033 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TIMP1P01033 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 AC133539.2-201ENST00000604757 467 ntBASIC17.71■□□□□ 0.43
TIMP1P01033 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TIMP1P01033 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TIMP1P01033 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMP1P01033 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
TIMP1P01033 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TIMP1P01033 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TIMP1P01033 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
TIMP1P01033 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.71■□□□□ 0.42
TIMP1P01033 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
TIMP1P01033 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMP1P01033 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
TIMP1P01033 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP1P01033 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP1P01033 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP1P01033 FAM21FP-201ENST00000426241 1131 ntBASIC17.7■□□□□ 0.42
TIMP1P01033 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMP1P01033 AL442647.2-201ENST00000429864 857 ntBASIC17.7■□□□□ 0.42
TIMP1P01033 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP1P01033 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP1P01033 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP1P01033 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP1P01033 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP1P01033 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP1P01033 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.7■□□□□ 0.42
TIMP1P01033 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP1P01033 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMP1P01033 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMP1P01033 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.7■□□□□ 0.42
TIMP1P01033 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 MIR5189-201ENST00000577370 114 ntBASIC17.7■□□□□ 0.42
TIMP1P01033 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP1P01033 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.7■□□□□ 0.42
TIMP1P01033 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 CU634019.7-201ENST00000624153 1185 ntBASIC17.7■□□□□ 0.42
TIMP1P01033 FP236241.2-201ENST00000624906 1185 ntBASIC17.7■□□□□ 0.42
TIMP1P01033 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMP1P01033 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TIMP1P01033 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMP1P01033 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
TIMP1P01033 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMP1P01033 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms