Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ALDH1A1P00352 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ALDH1A1P00352 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 ABALON-201ENST00000629058 1903 ntBASIC18.71■□□□□ 0.59
ALDH1A1P00352 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.71■□□□□ 0.59
ALDH1A1P00352 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 ENPP7P5-201ENST00000541031 1031 ntBASIC18.71■□□□□ 0.59
ALDH1A1P00352 PTP4A1P2-201ENST00000546033 454 ntBASIC18.71■□□□□ 0.59
ALDH1A1P00352 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 AC020765.3-201ENST00000613051 740 ntBASIC18.71■□□□□ 0.59
ALDH1A1P00352 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 PPA1-206ENST00000625364 644 ntTSL 5 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 AC012317.2-201ENST00000623305 2251 ntBASIC18.71■□□□□ 0.59
ALDH1A1P00352 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.71■□□□□ 0.59
ALDH1A1P00352 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ALDH1A1P00352 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ALDH1A1P00352 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.71■□□□□ 0.58
ALDH1A1P00352 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 BCRP2-202ENST00000447763 634 ntBASIC18.7■□□□□ 0.58
ALDH1A1P00352 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 AC007551.1-201ENST00000457394 519 ntBASIC18.7■□□□□ 0.58
ALDH1A1P00352 KRT8P13-201ENST00000463294 1010 ntBASIC18.7■□□□□ 0.58
ALDH1A1P00352 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 BCRP6-201ENST00000510112 632 ntBASIC18.7■□□□□ 0.58
ALDH1A1P00352 BCRP7-201ENST00000511549 544 ntBASIC18.7■□□□□ 0.58
ALDH1A1P00352 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 RHOQP1-201ENST00000555758 579 ntBASIC18.7■□□□□ 0.58
ALDH1A1P00352 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 AC010328.2-201ENST00000597698 1111 ntBASIC18.7■□□□□ 0.58
ALDH1A1P00352 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.7■□□□□ 0.58
ALDH1A1P00352 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ALDH1A1P00352 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 AC020763.4-201ENST00000623414 4170 ntBASIC18.69■□□□□ 0.58
ALDH1A1P00352 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ALDH1A1P00352 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.69■□□□□ 0.58
ALDH1A1P00352 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ALDH1A1P00352 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms