Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.57■□□□□ 0.4
ZBED1O96006 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 MIR3909-201ENST00000579518 119 ntBASIC17.57■□□□□ 0.4
ZBED1O96006 AL009183.1-201ENST00000603760 355 ntBASIC17.57■□□□□ 0.4
ZBED1O96006 AL031055.1-201ENST00000606362 631 ntBASIC17.57■□□□□ 0.4
ZBED1O96006 AC092902.6-201ENST00000641783 218 ntBASIC17.57■□□□□ 0.4
ZBED1O96006 AL139011.1-202ENST00000642063 584 ntBASIC17.57■□□□□ 0.4
ZBED1O96006 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ZBED1O96006 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZBED1O96006 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.57■□□□□ 0.4
ZBED1O96006 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.57■□□□□ 0.4
ZBED1O96006 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 FER1L4-210ENST00000615531 5998 ntBASIC17.57■□□□□ 0.4
ZBED1O96006 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZBED1O96006 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZBED1O96006 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.56■□□□□ 0.4
ZBED1O96006 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ZBED1O96006 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.56■□□□□ 0.4
ZBED1O96006 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.56■□□□□ 0.4
ZBED1O96006 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.56■□□□□ 0.4
ZBED1O96006 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.56■□□□□ 0.4
ZBED1O96006 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.56■□□□□ 0.4
ZBED1O96006 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 YBX1P5-201ENST00000509441 847 ntBASIC17.56■□□□□ 0.4
ZBED1O96006 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.56■□□□□ 0.4
ZBED1O96006 AC109635.5-201ENST00000533593 962 ntBASIC17.56■□□□□ 0.4
ZBED1O96006 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.56■□□□□ 0.4
ZBED1O96006 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.56■□□□□ 0.4
ZBED1O96006 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.56■□□□□ 0.4
ZBED1O96006 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.56■□□□□ 0.4
ZBED1O96006 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ZBED1O96006 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.56■□□□□ 0.4
ZBED1O96006 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.56■□□□□ 0.4
ZBED1O96006 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.56■□□□□ 0.4
ZBED1O96006 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 SNX33P1-201ENST00000592116 1762 ntBASIC17.56■□□□□ 0.4
ZBED1O96006 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZBED1O96006 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZBED1O96006 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.55■□□□□ 0.4
ZBED1O96006 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 UBALD1-205ENST00000590891 2641 ntBASIC17.55■□□□□ 0.4
ZBED1O96006 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.55■□□□□ 0.4
ZBED1O96006 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ZBED1O96006 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 MIR1233-2-201ENST00000408138 82 ntBASIC17.55■□□□□ 0.4
ZBED1O96006 MIR1233-1-201ENST00000408722 82 ntBASIC17.55■□□□□ 0.4
ZBED1O96006 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.55■□□□□ 0.4
ZBED1O96006 ACTG1P14-201ENST00000446382 1122 ntBASIC17.55■□□□□ 0.4
ZBED1O96006 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ZBED1O96006 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.55■□□□□ 0.4
ZBED1O96006 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
ZBED1O96006 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.55■□□□□ 0.4
ZBED1O96006 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ZBED1O96006 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.55■□□□□ 0.4
ZBED1O96006 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 KRT8P39-201ENST00000396270 1433 ntBASIC17.55■□□□□ 0.4
ZBED1O96006 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZBED1O96006 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZBED1O96006 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ZBED1O96006 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms