Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTNND1O60716 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CTNND1O60716 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.3■□□□□ 0.68
CTNND1O60716 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.3■□□□□ 0.68
CTNND1O60716 AC007541.1-201ENST00000570282 1469 ntBASIC19.3■□□□□ 0.68
CTNND1O60716 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTNND1O60716 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CTNND1O60716 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.3■□□□□ 0.68
CTNND1O60716 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.3■□□□□ 0.68
CTNND1O60716 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.3■□□□□ 0.68
CTNND1O60716 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.3■□□□□ 0.68
CTNND1O60716 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.3■□□□□ 0.68
CTNND1O60716 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.3■□□□□ 0.68
CTNND1O60716 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.3■□□□□ 0.68
CTNND1O60716 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.3■□□□□ 0.68
CTNND1O60716 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.3■□□□□ 0.68
CTNND1O60716 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.3■□□□□ 0.68
CTNND1O60716 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.3■□□□□ 0.68
CTNND1O60716 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.3■□□□□ 0.68
CTNND1O60716 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.3■□□□□ 0.68
CTNND1O60716 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.3■□□□□ 0.68
CTNND1O60716 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CTNND1O60716 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTNND1O60716 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.3■□□□□ 0.68
CTNND1O60716 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.3■□□□□ 0.68
CTNND1O60716 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTNND1O60716 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTNND1O60716 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.3■□□□□ 0.68
CTNND1O60716 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTNND1O60716 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CTNND1O60716 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.29■□□□□ 0.68
CTNND1O60716 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 OR8S1-201ENST00000310194 1080 ntBASIC19.29■□□□□ 0.68
CTNND1O60716 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CTNND1O60716 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CTNND1O60716 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.29■□□□□ 0.68
CTNND1O60716 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.29■□□□□ 0.68
CTNND1O60716 MEIS3P1-201ENST00000495167 958 ntBASIC19.29■□□□□ 0.68
CTNND1O60716 API5-211ENST00000534695 560 ntTSL 5 BASIC19.29■□□□□ 0.68
CTNND1O60716 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.29■□□□□ 0.68
CTNND1O60716 AL132655.2-201ENST00000596276 594 ntBASIC19.29■□□□□ 0.68
CTNND1O60716 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
CTNND1O60716 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.29■□□□□ 0.68
CTNND1O60716 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CTNND1O60716 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.29■□□□□ 0.68
CTNND1O60716 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTNND1O60716 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CTNND1O60716 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 AC093724.1-201ENST00000448659 1027 ntBASIC19.28■□□□□ 0.68
CTNND1O60716 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTNND1O60716 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 AC135586.1-201ENST00000539323 574 ntBASIC19.28■□□□□ 0.68
CTNND1O60716 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.28■□□□□ 0.68
CTNND1O60716 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.28■□□□□ 0.68
CTNND1O60716 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.28■□□□□ 0.68
CTNND1O60716 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.28■□□□□ 0.68
CTNND1O60716 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.28■□□□□ 0.68
CTNND1O60716 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.28■□□□□ 0.68
CTNND1O60716 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CTNND1O60716 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTNND1O60716 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms