Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APAF1O14727 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APAF1O14727 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.82■■□□□ 1.08
APAF1O14727 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
APAF1O14727 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
APAF1O14727 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
APAF1O14727 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
APAF1O14727 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.81■■□□□ 1.08
APAF1O14727 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.81■■□□□ 1.08
APAF1O14727 LINC01144-201ENST00000626198 1710 ntBASIC21.81■■□□□ 1.08
APAF1O14727 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.81■■□□□ 1.08
APAF1O14727 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.81■■□□□ 1.08
APAF1O14727 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
APAF1O14727 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.81■■□□□ 1.08
APAF1O14727 MKNK2P1-201ENST00000437526 628 ntBASIC21.81■■□□□ 1.08
APAF1O14727 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.81■■□□□ 1.08
APAF1O14727 AC092865.5-201ENST00000545435 363 ntBASIC21.81■■□□□ 1.08
APAF1O14727 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.81■■□□□ 1.08
APAF1O14727 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.81■■□□□ 1.08
APAF1O14727 AL138918.1-201ENST00000568306 659 ntBASIC21.81■■□□□ 1.08
APAF1O14727 AC005829.1-201ENST00000570002 483 ntBASIC21.81■■□□□ 1.08
APAF1O14727 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
APAF1O14727 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.81■■□□□ 1.08
APAF1O14727 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APAF1O14727 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
APAF1O14727 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
APAF1O14727 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.8■■□□□ 1.08
APAF1O14727 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC21.8■■□□□ 1.08
APAF1O14727 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21.8■■□□□ 1.08
APAF1O14727 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
APAF1O14727 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
APAF1O14727 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.8■■□□□ 1.08
APAF1O14727 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC21.8■■□□□ 1.08
APAF1O14727 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 UPF3AP3-201ENST00000420996 769 ntBASIC21.8■■□□□ 1.08
APAF1O14727 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.8■■□□□ 1.08
APAF1O14727 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.8■■□□□ 1.08
APAF1O14727 RARRES2P8-201ENST00000566335 367 ntBASIC21.8■■□□□ 1.08
APAF1O14727 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.8■■□□□ 1.08
APAF1O14727 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.8■■□□□ 1.08
APAF1O14727 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
APAF1O14727 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
APAF1O14727 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.79■■□□□ 1.08
APAF1O14727 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
APAF1O14727 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
APAF1O14727 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.79■■□□□ 1.08
APAF1O14727 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
APAF1O14727 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 ELL2P1-201ENST00000413990 1906 ntBASIC21.79■■□□□ 1.08
APAF1O14727 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.79■■□□□ 1.08
APAF1O14727 TFAMP1-201ENST00000412727 736 ntBASIC21.79■■□□□ 1.08
APAF1O14727 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.79■■□□□ 1.08
APAF1O14727 DNAJB3-201ENST00000446806 729 ntBASIC21.79■■□□□ 1.08
APAF1O14727 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 KRT18P34-201ENST00000488218 1270 ntBASIC21.79■■□□□ 1.08
APAF1O14727 YBX1P5-201ENST00000509441 847 ntBASIC21.79■■□□□ 1.08
APAF1O14727 KRT8P48-201ENST00000515599 1220 ntBASIC21.79■■□□□ 1.08
APAF1O14727 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 AC243562.1-201ENST00000560672 389 ntBASIC21.79■■□□□ 1.08
APAF1O14727 AL135744.1-201ENST00000565098 629 ntBASIC21.79■■□□□ 1.08
APAF1O14727 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.79■■□□□ 1.08
APAF1O14727 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
APAF1O14727 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.79■■□□□ 1.08
APAF1O14727 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
APAF1O14727 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
APAF1O14727 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms