Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 AC090164.3-201ENST00000610780 2143 ntBASIC20.57■□□□□ 0.88
RGPD3A6NKT7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 GPAA1P2-202ENST00000606848 1787 ntBASIC20.57■□□□□ 0.88
RGPD3A6NKT7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20.57■□□□□ 0.88
RGPD3A6NKT7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 GGT4P-201ENST00000623672 1708 ntBASIC20.56■□□□□ 0.88
RGPD3A6NKT7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 AC074338.1-201ENST00000416825 156 ntBASIC20.56■□□□□ 0.88
RGPD3A6NKT7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 AC005077.2-201ENST00000449786 690 ntBASIC20.56■□□□□ 0.88
RGPD3A6NKT7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.56■□□□□ 0.88
RGPD3A6NKT7 EEF1DP1-201ENST00000585891 896 ntBASIC20.56■□□□□ 0.88
RGPD3A6NKT7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RGPD3A6NKT7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 VDAC1P7-201ENST00000462417 847 ntBASIC20.55■□□□□ 0.88
RGPD3A6NKT7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 NDUFV2P1-201ENST00000596415 907 ntBASIC20.55■□□□□ 0.88
RGPD3A6NKT7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RGPD3A6NKT7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD3A6NKT7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD3A6NKT7 C2orf27AP3-201ENST00000434123 579 ntBASIC20.54■□□□□ 0.88
RGPD3A6NKT7 TARDBPP1-201ENST00000442013 1203 ntBASIC20.54■□□□□ 0.88
RGPD3A6NKT7 AC093433.1-201ENST00000458048 571 ntBASIC20.54■□□□□ 0.88
RGPD3A6NKT7 IMP3P2-201ENST00000489760 475 ntBASIC20.54■□□□□ 0.88
RGPD3A6NKT7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.54■□□□□ 0.88
RGPD3A6NKT7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC20.54■□□□□ 0.88
RGPD3A6NKT7 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC20.54■□□□□ 0.88
RGPD3A6NKT7 AL354718.3-201ENST00000616414 581 ntBASIC20.54■□□□□ 0.88
RGPD3A6NKT7 CR382287.1-201ENST00000623954 586 ntBASIC20.54■□□□□ 0.88
RGPD3A6NKT7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD3A6NKT7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RGPD3A6NKT7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms