Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smim17A0A504 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Smim17A0A504 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Smim17A0A504 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.31□□□□□ -0.44
Smim17A0A504 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Smim17A0A504 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.31□□□□□ -0.44
Smim17A0A504 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Smim17A0A504 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.31□□□□□ -0.44
Smim17A0A504 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.31□□□□□ -0.44
Smim17A0A504 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Smim17A0A504 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Smim17A0A504 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smim17A0A504 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Smim17A0A504 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Smim17A0A504 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.3□□□□□ -0.44
Smim17A0A504 Gm11780-201ENSMUST00000136880 516 ntBASIC12.3□□□□□ -0.44
Smim17A0A504 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.3□□□□□ -0.44
Smim17A0A504 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.3□□□□□ -0.44
Smim17A0A504 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.3□□□□□ -0.44
Smim17A0A504 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.3□□□□□ -0.44
Smim17A0A504 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.3□□□□□ -0.44
Smim17A0A504 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.3□□□□□ -0.44
Smim17A0A504 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.3□□□□□ -0.44
Smim17A0A504 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.3□□□□□ -0.44
Smim17A0A504 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.3□□□□□ -0.44
Smim17A0A504 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Smim17A0A504 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.3□□□□□ -0.44
Smim17A0A504 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Smim17A0A504 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.29□□□□□ -0.44
Smim17A0A504 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.29□□□□□ -0.44
Smim17A0A504 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Smim17A0A504 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.29□□□□□ -0.44
Smim17A0A504 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.29□□□□□ -0.44
Smim17A0A504 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smim17A0A504 Gm17807-201ENSMUST00000186869 298 ntBASIC12.29□□□□□ -0.44
Smim17A0A504 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.29□□□□□ -0.44
Smim17A0A504 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms