Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA1Q9Y5H4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 INE1-201ENST00000456273 945 ntBASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 AL079307.3-201ENST00000556114 283 ntBASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 AC139713.2-201ENST00000641328 2723 ntBASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 AC068880.1-201ENST00000507289 2297 ntBASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA1Q9Y5H4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 AC073439.1-201ENST00000624121 1774 ntBASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 DGCR5-201ENST00000399539 862 ntBASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 AL080243.2-201ENST00000418783 582 ntBASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 RN7SL618P-201ENST00000477850 296 ntBASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 AC010336.2-201ENST00000564226 506 ntBASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 AL133215.2-201ENST00000609242 977 ntBASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 IGHV3-72-202ENST00000621503 303 ntBASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.91■□□□□ 0.14
PCDHGA1Q9Y5H4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA1Q9Y5H4 AL355312.1-201ENST00000407115 2176 ntBASIC15.9■□□□□ 0.14
PCDHGA1Q9Y5H4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA1Q9Y5H4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA1Q9Y5H4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA1Q9Y5H4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA1Q9Y5H4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA1Q9Y5H4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA1Q9Y5H4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms