Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 HLA-F-220ENST00000434407 884 ntBASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 GPR32P1-201ENST00000601788 811 ntBASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 CDC14C-201ENST00000428251 1719 ntBASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 AL353593.2-201ENST00000602529 1483 ntBASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 LINC02447-202ENST00000501888 2146 ntBASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 PRAL-201ENST00000624952 3286 ntBASIC15.25■□□□□ 0.03
TPRKBQ9Y3C4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 AC097376.2-205ENST00000610159 5334 ntBASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 FAM8A6P-201ENST00000407496 1135 ntBASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.24■□□□□ 0.03
TPRKBQ9Y3C4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 AC003669.1-201ENST00000334569 611 ntBASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 ECEL1P3-201ENST00000427961 737 ntBASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 ZNF444P1-201ENST00000559497 298 ntBASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 SBF1P1-201ENST00000444527 5631 ntBASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 KRT8P49-201ENST00000604166 1432 ntBASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TPRKBQ9Y3C4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.22■□□□□ 0.03
TPRKBQ9Y3C4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms