Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RPGRQ92834 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPGRQ92834 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.34■□□□□ 0.85
RPGRQ92834 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
RPGRQ92834 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.34■□□□□ 0.85
RPGRQ92834 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.33■□□□□ 0.85
RPGRQ92834 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.33■□□□□ 0.85
RPGRQ92834 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.33■□□□□ 0.85
RPGRQ92834 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.33■□□□□ 0.85
RPGRQ92834 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RPGRQ92834 PCDHB17P-201ENST00000539533 2393 ntBASIC20.33■□□□□ 0.85
RPGRQ92834 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
RPGRQ92834 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPGRQ92834 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.33■□□□□ 0.85
RPGRQ92834 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC20.33■□□□□ 0.85
RPGRQ92834 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC20.33■□□□□ 0.85
RPGRQ92834 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.33■□□□□ 0.85
RPGRQ92834 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.33■□□□□ 0.85
RPGRQ92834 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC20.33■□□□□ 0.85
RPGRQ92834 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.33■□□□□ 0.85
RPGRQ92834 AC026979.3-201ENST00000607315 403 ntBASIC20.33■□□□□ 0.85
RPGRQ92834 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RPGRQ92834 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRQ92834 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRQ92834 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRQ92834 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRQ92834 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRQ92834 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRQ92834 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPGRQ92834 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RPGRQ92834 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRQ92834 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRQ92834 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RPGRQ92834 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RPGRQ92834 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRQ92834 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RPGRQ92834 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRQ92834 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
RPGRQ92834 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRQ92834 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRQ92834 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRQ92834 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRQ92834 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.32■□□□□ 0.84
RPGRQ92834 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RPGRQ92834 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRQ92834 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.32■□□□□ 0.84
RPGRQ92834 AC017083.2-201ENST00000608069 979 ntBASIC20.32■□□□□ 0.84
RPGRQ92834 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.32■□□□□ 0.84
RPGRQ92834 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.32■□□□□ 0.84
RPGRQ92834 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRQ92834 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RPGRQ92834 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRQ92834 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRQ92834 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RPGRQ92834 SLC7A15P-201ENST00000424028 1363 ntBASIC20.32■□□□□ 0.84
RPGRQ92834 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.32■□□□□ 0.84
RPGRQ92834 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPGRQ92834 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.31■□□□□ 0.84
RPGRQ92834 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.31■□□□□ 0.84
RPGRQ92834 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RPGRQ92834 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 AC114501.2-201ENST00000439631 535 ntBASIC20.31■□□□□ 0.84
RPGRQ92834 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RPGRQ92834 AL033527.5-202ENST00000641632 1098 ntBASIC20.31■□□□□ 0.84
RPGRQ92834 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.31■□□□□ 0.84
RPGRQ92834 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.31■□□□□ 0.84
RPGRQ92834 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.31■□□□□ 0.84
RPGRQ92834 KRT8P12-202ENST00000472924 1397 ntBASIC20.31■□□□□ 0.84
RPGRQ92834 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 AL023806.1-201ENST00000603994 1649 ntBASIC20.31■□□□□ 0.84
RPGRQ92834 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPGRQ92834 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms