Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.71□□□□□ -0.05
AP3S1Q92572 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S1Q92572 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.71□□□□□ -0.05
AP3S1Q92572 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
AP3S1Q92572 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
AP3S1Q92572 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
AP3S1Q92572 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 AC007967.3-201ENST00000434308 558 ntBASIC14.71□□□□□ -0.05
AP3S1Q92572 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.71□□□□□ -0.05
AP3S1Q92572 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.71□□□□□ -0.05
AP3S1Q92572 AC128688.1-201ENST00000487626 519 ntBASIC14.71□□□□□ -0.05
AP3S1Q92572 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S1Q92572 STK19B-204ENST00000512515 211 ntBASIC14.71□□□□□ -0.05
AP3S1Q92572 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S1Q92572 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
AP3S1Q92572 AL136038.4-201ENST00000603606 1261 ntBASIC14.71□□□□□ -0.05
AP3S1Q92572 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S1Q92572 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.71□□□□□ -0.05
AP3S1Q92572 CDC14C-201ENST00000428251 1719 ntBASIC14.71□□□□□ -0.05
AP3S1Q92572 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
AP3S1Q92572 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
AP3S1Q92572 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S1Q92572 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP3S1Q92572 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
AP3S1Q92572 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP3S1Q92572 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
AP3S1Q92572 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
AP3S1Q92572 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S1Q92572 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S1Q92572 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
AP3S1Q92572 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.7□□□□□ -0.06
AP3S1Q92572 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 ABHD17AP1-201ENST00000358206 933 ntBASIC14.7□□□□□ -0.06
AP3S1Q92572 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S1Q92572 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S1Q92572 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S1Q92572 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.7□□□□□ -0.06
AP3S1Q92572 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S1Q92572 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.7□□□□□ -0.06
AP3S1Q92572 AC013467.2-201ENST00000605472 835 ntBASIC14.7□□□□□ -0.06
AP3S1Q92572 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S1Q92572 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S1Q92572 AC112504.1-201ENST00000623415 1841 ntBASIC14.7□□□□□ -0.06
AP3S1Q92572 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S1Q92572 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.7□□□□□ -0.06
AP3S1Q92572 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
AP3S1Q92572 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S1Q92572 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
AP3S1Q92572 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 PRAL-201ENST00000624952 3286 ntBASIC14.7□□□□□ -0.06
AP3S1Q92572 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S1Q92572 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.7□□□□□ -0.06
AP3S1Q92572 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
AP3S1Q92572 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
AP3S1Q92572 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
AP3S1Q92572 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 AL391807.1-203ENST00000604392 2365 ntBASIC14.69□□□□□ -0.06
AP3S1Q92572 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.69□□□□□ -0.06
AP3S1Q92572 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.69□□□□□ -0.06
AP3S1Q92572 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
AP3S1Q92572 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.69□□□□□ -0.06
AP3S1Q92572 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.69□□□□□ -0.06
AP3S1Q92572 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
AP3S1Q92572 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
AP3S1Q92572 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
AP3S1Q92572 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
AP3S1Q92572 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms