Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 AP002490.2-201ENST00000524791 560 ntBASIC17.13■□□□□ 0.33
SCG3Q8WXD2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 MIR3687-2-201ENST00000577708 61 ntBASIC17.13■□□□□ 0.33
SCG3Q8WXD2 MIR3687-1-201ENST00000614492 61 ntBASIC17.13■□□□□ 0.33
SCG3Q8WXD2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCG3Q8WXD2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 FRMD8P1-201ENST00000440433 1524 ntBASIC17.12■□□□□ 0.33
SCG3Q8WXD2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 AC009947.1-201ENST00000444350 727 ntBASIC17.12■□□□□ 0.33
SCG3Q8WXD2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCG3Q8WXD2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 AC148477.5-201ENST00000625164 1645 ntBASIC17.11■□□□□ 0.33
SCG3Q8WXD2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 DNAJB3-201ENST00000446806 729 ntBASIC17.11■□□□□ 0.33
SCG3Q8WXD2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 AC108751.1-201ENST00000490852 363 ntBASIC17.11■□□□□ 0.33
SCG3Q8WXD2 PGAM5P1-201ENST00000518923 814 ntBASIC17.11■□□□□ 0.33
SCG3Q8WXD2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 AC004706.3-202ENST00000621574 984 ntBASIC17.11■□□□□ 0.33
SCG3Q8WXD2 AC007950.2-201ENST00000615045 2347 ntBASIC17.11■□□□□ 0.33
SCG3Q8WXD2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 TUBB8P12-201ENST00000308911 1335 ntBASIC17.11■□□□□ 0.33
SCG3Q8WXD2 TUBB7P-202ENST00000428444 1305 ntBASIC17.11■□□□□ 0.33
SCG3Q8WXD2 TUBB8P7-204ENST00000567960 1332 ntBASIC17.11■□□□□ 0.33
SCG3Q8WXD2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SCG3Q8WXD2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms