Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 AC093512.1-201ENST00000617969 520 ntBASIC16.67■□□□□ 0.26
CHD5Q8TDI0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHD5Q8TDI0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 LINC01144-201ENST00000626198 1710 ntBASIC16.66■□□□□ 0.26
CHD5Q8TDI0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 MIR6080-201ENST00000617359 66 ntBASIC16.66■□□□□ 0.26
CHD5Q8TDI0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 AL589702.1-201ENST00000641229 1509 ntBASIC16.66■□□□□ 0.26
CHD5Q8TDI0 PCDHB19P-201ENST00000570871 2371 ntBASIC16.66■□□□□ 0.26
CHD5Q8TDI0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.66■□□□□ 0.26
CHD5Q8TDI0 SNHG9-202ENST00000564014 471 ntBASIC16.66■□□□□ 0.26
CHD5Q8TDI0 AC027796.2-201ENST00000575326 344 ntBASIC16.66■□□□□ 0.26
CHD5Q8TDI0 AC093028.1-201ENST00000622998 982 ntBASIC16.66■□□□□ 0.26
CHD5Q8TDI0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 AL080243.2-201ENST00000418783 582 ntBASIC16.65■□□□□ 0.26
CHD5Q8TDI0 RBPMS2P1-201ENST00000437762 623 ntBASIC16.65■□□□□ 0.26
CHD5Q8TDI0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 AC140878.1-201ENST00000565277 250 ntBASIC16.65■□□□□ 0.26
CHD5Q8TDI0 AC007967.4-201ENST00000614700 386 ntBASIC16.65■□□□□ 0.26
CHD5Q8TDI0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CHD5Q8TDI0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHD5Q8TDI0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHD5Q8TDI0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CHD5Q8TDI0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.64■□□□□ 0.26
CHD5Q8TDI0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 EEF1DP4-201ENST00000446006 880 ntBASIC16.64■□□□□ 0.25
CHD5Q8TDI0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 U82695.1-201ENST00000635752 1889 ntBASIC16.64■□□□□ 0.25
CHD5Q8TDI0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHD5Q8TDI0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms