Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 Z97205.2-201ENST00000564697 1639 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 AL354751.1-201ENST00000412768 1863 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 AC090164.3-201ENST00000610780 2143 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 ACTG1P3-201ENST00000431775 1114 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 AC010328.2-201ENST00000597698 1111 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 NEFHP1-201ENST00000412845 2629 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 INTS4P2-202ENST00000614726 2019 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 MSTO2P-201ENST00000314835 1709 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 AL136982.4-201ENST00000437689 1740 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 AC253536.4-201ENST00000440539 267 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 RPL13P2-201ENST00000440687 659 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 BTBD6P1-201ENST00000412176 1267 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 CHMP4BP1-201ENST00000556017 588 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 AL365330.1-201ENST00000607459 531 ntBASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC10.98□□□□□ -0.65
ALMS1Q8TCU4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 PC-204ENST00000524491 1714 ntTSL 2 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 SOCS2P1-201ENST00000417727 557 ntBASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 AL139010.1-201ENST00000454878 894 ntBASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 AC116353.5-201ENST00000638148 1699 ntBASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 LDHBP1-201ENST00000455730 1119 ntBASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 SPCS2P2-201ENST00000603270 608 ntBASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.97□□□□□ -0.65
ALMS1Q8TCU4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms