Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 SPDYE17-201ENST00000412399 783 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 AC013467.2-201ENST00000605472 835 ntBASIC10.11□□□□□ -0.79
VPS13BQ7Z7G8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AP001094.4-201ENST00000579008 2176 ntBASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 GOLGA2P9-201ENST00000596977 1937 ntBASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AC007431.3-201ENST00000623221 587 ntBASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AL035456.1-201ENST00000456064 1369 ntBASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AL512361.1-201ENST00000554200 418 ntBASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 SIGLEC29P-201ENST00000599873 1114 ntBASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 AL391069.4-201ENST00000609583 481 ntBASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13BQ7Z7G8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 ELK2AP-201ENST00000392510 1007 ntBASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 UBALD1-205ENST00000590891 2641 ntBASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AC016396.2-201ENST00000562575 1417 ntBASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 RNF216P1-203ENST00000404404 2427 ntBASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VPS13BQ7Z7G8 AC141586.5-201ENST00000624546 2050 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms