Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.34□□□□□ -0.11
AP3S2P59780 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.34□□□□□ -0.11
AP3S2P59780 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S2P59780 STK19B-204ENST00000512515 211 ntBASIC14.34□□□□□ -0.11
AP3S2P59780 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S2P59780 AL136038.4-201ENST00000603606 1261 ntBASIC14.34□□□□□ -0.11
AP3S2P59780 AC026471.5-201ENST00000615068 467 ntBASIC14.34□□□□□ -0.11
AP3S2P59780 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
AP3S2P59780 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S2P59780 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.34□□□□□ -0.11
AP3S2P59780 AC009336.1-201ENST00000608941 1553 ntBASIC14.34□□□□□ -0.11
AP3S2P59780 AL049757.1-201ENST00000616842 1596 ntBASIC14.34□□□□□ -0.11
AP3S2P59780 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.34□□□□□ -0.11
AP3S2P59780 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AP3S2P59780 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
AP3S2P59780 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AP3S2P59780 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AP3S2P59780 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
AP3S2P59780 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
AP3S2P59780 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
AP3S2P59780 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.33□□□□□ -0.11
AP3S2P59780 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.33□□□□□ -0.11
AP3S2P59780 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
AP3S2P59780 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
AP3S2P59780 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AP3S2P59780 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
AP3S2P59780 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S2P59780 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S2P59780 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S2P59780 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 TSPY14P-201ENST00000303979 915 ntBASIC14.33□□□□□ -0.12
AP3S2P59780 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S2P59780 AC007967.3-201ENST00000434308 558 ntBASIC14.33□□□□□ -0.12
AP3S2P59780 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.33□□□□□ -0.12
AP3S2P59780 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S2P59780 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S2P59780 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.33□□□□□ -0.12
AP3S2P59780 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.33□□□□□ -0.12
AP3S2P59780 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S2P59780 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
AP3S2P59780 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 AL391807.1-203ENST00000604392 2365 ntBASIC14.33□□□□□ -0.12
AP3S2P59780 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S2P59780 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
AP3S2P59780 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S2P59780 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 AL353692.3-201ENST00000407031 1396 ntBASIC14.33□□□□□ -0.12
AP3S2P59780 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S2P59780 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.33□□□□□ -0.12
AP3S2P59780 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AP3S2P59780 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.32□□□□□ -0.12
AP3S2P59780 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
AP3S2P59780 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AP3S2P59780 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms