Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
SRP9P49458 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP9P49458 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.84□□□□□ -0.03
SRP9P49458 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP9P49458 AL020989.1-201ENST00000422979 469 ntBASIC14.84□□□□□ -0.03
SRP9P49458 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.84□□□□□ -0.03
SRP9P49458 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.84□□□□□ -0.03
SRP9P49458 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.84□□□□□ -0.03
SRP9P49458 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.84□□□□□ -0.03
SRP9P49458 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.84□□□□□ -0.03
SRP9P49458 AL355877.3-201ENST00000622820 899 ntBASIC14.84□□□□□ -0.03
SRP9P49458 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP9P49458 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP9P49458 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.84□□□□□ -0.03
SRP9P49458 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP9P49458 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRP9P49458 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.84□□□□□ -0.03
SRP9P49458 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SRP9P49458 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.83□□□□□ -0.03
SRP9P49458 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRP9P49458 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
SRP9P49458 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRP9P49458 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRP9P49458 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.83□□□□□ -0.03
SRP9P49458 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.83□□□□□ -0.03
SRP9P49458 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.83□□□□□ -0.03
SRP9P49458 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.83□□□□□ -0.04
SRP9P49458 HLA-A-202ENST00000376806 1854 ntBASIC14.83□□□□□ -0.04
SRP9P49458 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SRP9P49458 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
SRP9P49458 SIGLEC30P-201ENST00000455569 941 ntBASIC14.83□□□□□ -0.04
SRP9P49458 UNC93B7-201ENST00000509439 705 ntBASIC14.83□□□□□ -0.04
SRP9P49458 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.83□□□□□ -0.04
SRP9P49458 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 RN7SL510P-201ENST00000581311 263 ntBASIC14.83□□□□□ -0.04
SRP9P49458 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 AL139288.1-201ENST00000623748 933 ntBASIC14.83□□□□□ -0.04
SRP9P49458 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SRP9P49458 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.83□□□□□ -0.04
SRP9P49458 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SRP9P49458 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SRP9P49458 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.83□□□□□ -0.04
SRP9P49458 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.83□□□□□ -0.04
SRP9P49458 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRP9P49458 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.82□□□□□ -0.04
SRP9P49458 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 AC009336.1-201ENST00000608941 1553 ntBASIC14.82□□□□□ -0.04
SRP9P49458 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 AC079776.2-201ENST00000641154 1609 ntBASIC14.82□□□□□ -0.04
SRP9P49458 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SRP9P49458 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.82□□□□□ -0.04
SRP9P49458 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SRP9P49458 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms