Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.22□□□□□ -0.29
CDC34P49427 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CDC34P49427 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC34P49427 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CDC34P49427 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.22□□□□□ -0.29
CDC34P49427 GGT4P-201ENST00000623672 1708 ntBASIC13.22□□□□□ -0.29
CDC34P49427 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDC34P49427 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.22□□□□□ -0.29
CDC34P49427 AC006449.6-201ENST00000612330 2296 ntBASIC13.22□□□□□ -0.29
CDC34P49427 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CDC34P49427 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CDC34P49427 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.21□□□□□ -0.29
CDC34P49427 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.21□□□□□ -0.29
CDC34P49427 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CDC34P49427 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.21□□□□□ -0.29
CDC34P49427 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.21□□□□□ -0.29
CDC34P49427 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.21□□□□□ -0.29
CDC34P49427 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CDC34P49427 AL158047.1-201ENST00000445918 881 ntBASIC13.21□□□□□ -0.29
CDC34P49427 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.21□□□□□ -0.29
CDC34P49427 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.21□□□□□ -0.29
CDC34P49427 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.21□□□□□ -0.29
CDC34P49427 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.21□□□□□ -0.29
CDC34P49427 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.21□□□□□ -0.29
CDC34P49427 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CDC34P49427 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CDC34P49427 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.21□□□□□ -0.29
CDC34P49427 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CDC34P49427 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDC34P49427 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDC34P49427 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CDC34P49427 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.21□□□□□ -0.3
CDC34P49427 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.21□□□□□ -0.3
CDC34P49427 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CDC34P49427 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.21□□□□□ -0.3
CDC34P49427 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
CDC34P49427 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
CDC34P49427 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.21□□□□□ -0.3
CDC34P49427 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CDC34P49427 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.2□□□□□ -0.3
CDC34P49427 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 AP005117.1-202ENST00000581724 1908 ntBASIC13.2□□□□□ -0.3
CDC34P49427 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 MIR935-201ENST00000401179 91 ntBASIC13.2□□□□□ -0.3
CDC34P49427 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.2□□□□□ -0.3
CDC34P49427 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.2□□□□□ -0.3
CDC34P49427 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.2□□□□□ -0.3
CDC34P49427 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.2□□□□□ -0.3
CDC34P49427 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDC34P49427 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.2□□□□□ -0.3
CDC34P49427 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.2□□□□□ -0.3
CDC34P49427 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.2□□□□□ -0.3
CDC34P49427 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.2□□□□□ -0.3
CDC34P49427 AC141257.4-201ENST00000634557 245 ntBASIC13.2□□□□□ -0.3
CDC34P49427 AC136944.6-201ENST00000634818 245 ntBASIC13.2□□□□□ -0.3
CDC34P49427 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms