Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE3O75131 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
CPNE3O75131 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE3O75131 SPDYE11-202ENST00000450699 704 ntBASIC16.02■□□□□ 0.16
CPNE3O75131 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE3O75131 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE3O75131 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CPNE3O75131 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
CPNE3O75131 SPDYE9P-201ENST00000570642 692 ntBASIC16.02■□□□□ 0.16
CPNE3O75131 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 SPDYE10P-202ENST00000612005 668 ntBASIC16.02■□□□□ 0.16
CPNE3O75131 SPDYE8P-202ENST00000612377 668 ntBASIC16.02■□□□□ 0.16
CPNE3O75131 AL161645.1-201ENST00000622716 1255 ntBASIC16.02■□□□□ 0.16
CPNE3O75131 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE3O75131 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
CPNE3O75131 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE3O75131 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE3O75131 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE3O75131 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.02■□□□□ 0.15
CPNE3O75131 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE3O75131 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE3O75131 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE3O75131 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.02■□□□□ 0.15
CPNE3O75131 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE3O75131 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE3O75131 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
CPNE3O75131 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CPNE3O75131 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
CPNE3O75131 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPNE3O75131 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CPNE3O75131 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPNE3O75131 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CPNE3O75131 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE3O75131 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE3O75131 HMGA1P7-201ENST00000406908 502 ntBASIC16.01■□□□□ 0.15
CPNE3O75131 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE3O75131 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE3O75131 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPNE3O75131 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CPNE3O75131 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.01■□□□□ 0.15
CPNE3O75131 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE3O75131 AC004449.1-201ENST00000564240 433 ntBASIC16.01■□□□□ 0.15
CPNE3O75131 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 AC091167.2-201ENST00000579581 588 ntBASIC16.01■□□□□ 0.15
CPNE3O75131 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.01■□□□□ 0.15
CPNE3O75131 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPNE3O75131 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.01■□□□□ 0.15
CPNE3O75131 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE3O75131 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPNE3O75131 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CPNE3O75131 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CPNE3O75131 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE3O75131 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 AL023806.1-201ENST00000603994 1649 ntBASIC16.01■□□□□ 0.15
CPNE3O75131 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE3O75131 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 TOP3BP1-201ENST00000420768 1380 ntBASIC16■□□□□ 0.15
CPNE3O75131 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16■□□□□ 0.15
CPNE3O75131 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16■□□□□ 0.15
CPNE3O75131 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16■□□□□ 0.15
CPNE3O75131 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16■□□□□ 0.15
CPNE3O75131 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16■□□□□ 0.15
CPNE3O75131 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16■□□□□ 0.15
CPNE3O75131 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16■□□□□ 0.15
CPNE3O75131 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms