Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
HFM1A2PYH4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC24.33■■□□□ 1.49
HFM1A2PYH4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HFM1A2PYH4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HFM1A2PYH4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC24.33■■□□□ 1.49
HFM1A2PYH4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC24.33■■□□□ 1.49
HFM1A2PYH4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HFM1A2PYH4 TEX28P1-201ENST00000613479 1221 ntBASIC24.33■■□□□ 1.49
HFM1A2PYH4 TEX28P2-201ENST00000617764 1221 ntBASIC24.33■■□□□ 1.49
HFM1A2PYH4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HFM1A2PYH4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC24.33■■□□□ 1.48
HFM1A2PYH4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.48
HFM1A2PYH4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 AC100757.3-201ENST00000622361 1406 ntBASIC24.32■■□□□ 1.48
HFM1A2PYH4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 AL844908.2-201ENST00000609461 460 ntBASIC24.32■■□□□ 1.48
HFM1A2PYH4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
HFM1A2PYH4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
HFM1A2PYH4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC24.31■■□□□ 1.48
HFM1A2PYH4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC24.31■■□□□ 1.48
HFM1A2PYH4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 AC004890.2-204ENST00000481968 304 ntBASIC24.31■■□□□ 1.48
HFM1A2PYH4 AC093214.1-201ENST00000511688 1107 ntBASIC24.31■■□□□ 1.48
HFM1A2PYH4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC24.31■■□□□ 1.48
HFM1A2PYH4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC24.31■■□□□ 1.48
HFM1A2PYH4 AC239800.4-201ENST00000603712 296 ntBASIC24.31■■□□□ 1.48
HFM1A2PYH4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC24.31■■□□□ 1.48
HFM1A2PYH4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
HFM1A2PYH4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
HFM1A2PYH4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 GRAMD4P3-201ENST00000621665 1669 ntBASIC24.31■■□□□ 1.48
HFM1A2PYH4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
HFM1A2PYH4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HFM1A2PYH4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
HFM1A2PYH4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC24.3■■□□□ 1.48
HFM1A2PYH4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
HFM1A2PYH4 MRPS18AP1-201ENST00000414458 589 ntBASIC24.3■■□□□ 1.48
HFM1A2PYH4 EEF1DP4-201ENST00000446006 880 ntBASIC24.3■■□□□ 1.48
HFM1A2PYH4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC24.3■■□□□ 1.48
HFM1A2PYH4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC24.3■■□□□ 1.48
HFM1A2PYH4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC24.3■■□□□ 1.48
HFM1A2PYH4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 RN7SL828P-201ENST00000607615 303 ntBASIC24.3■■□□□ 1.48
HFM1A2PYH4 AJ011932.1-201ENST00000621707 465 ntBASIC24.3■■□□□ 1.48
HFM1A2PYH4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC24.3■■□□□ 1.48
HFM1A2PYH4 REXO1L8P-201ENST00000604378 1897 ntBASIC24.3■■□□□ 1.48
HFM1A2PYH4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC24.3■■□□□ 1.48
HFM1A2PYH4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC24.3■■□□□ 1.48
HFM1A2PYH4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HFM1A2PYH4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HFM1A2PYH4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 FZD10-202ENST00000539839 3282 ntBASIC24.29■■□□□ 1.48
HFM1A2PYH4 MIR661-201ENST00000384842 89 ntBASIC24.29■■□□□ 1.48
HFM1A2PYH4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HFM1A2PYH4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 AC009477.1-201ENST00000452936 217 ntBASIC24.29■■□□□ 1.48
HFM1A2PYH4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
HFM1A2PYH4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
HFM1A2PYH4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms