Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 RPL37AP1-201ENST00000412502 279 ntBASIC19■□□□□ 0.63
SYNPO2Q9UMS6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 TERF1P3-201ENST00000505638 1227 ntBASIC19■□□□□ 0.63
SYNPO2Q9UMS6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 AC138761.1-201ENST00000584393 385 ntBASIC19■□□□□ 0.63
SYNPO2Q9UMS6 MIR4321-201ENST00000592276 80 ntBASIC19■□□□□ 0.63
SYNPO2Q9UMS6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19■□□□□ 0.63
SYNPO2Q9UMS6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 MIR661-201ENST00000384842 89 ntBASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 AL035633.1-201ENST00000406139 838 ntBASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 AL844908.2-201ENST00000609461 460 ntBASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 AC009118.2-201ENST00000613275 655 ntBASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 AC008761.3-201ENST00000624803 892 ntBASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 AC005622.1-201ENST00000636801 1703 ntBASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SYNPO2Q9UMS6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 MTND6P24-201ENST00000440466 518 ntBASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SYNPO2Q9UMS6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 KRT8P12-202ENST00000472924 1397 ntBASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 AC236430.1-201ENST00000402231 743 ntBASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SYNPO2Q9UMS6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms