Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 AC027307.2-201ENST00000591252 911 ntBASIC15.66■□□□□ 0.1
CTSFQ9UBX1 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSFQ9UBX1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 AC005915.1-201ENST00000624912 2018 ntBASIC15.65■□□□□ 0.1
CTSFQ9UBX1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 PCDHA12-202ENST00000613593 2588 ntBASIC15.65■□□□□ 0.1
CTSFQ9UBX1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.65■□□□□ 0.1
CTSFQ9UBX1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 GPS2P2-201ENST00000430745 888 ntBASIC15.65■□□□□ 0.1
CTSFQ9UBX1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 SLC25A39P2-201ENST00000537614 270 ntBASIC15.65■□□□□ 0.1
CTSFQ9UBX1 KRT8P23-201ENST00000560090 1207 ntBASIC15.65■□□□□ 0.1
CTSFQ9UBX1 AC025678.2-201ENST00000562061 970 ntBASIC15.65■□□□□ 0.1
CTSFQ9UBX1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 AL138918.1-201ENST00000568306 659 ntBASIC15.65■□□□□ 0.1
CTSFQ9UBX1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 AC008267.7-201ENST00000624570 1194 ntBASIC15.65■□□□□ 0.1
CTSFQ9UBX1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CTSFQ9UBX1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms