Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CUEDC1Q9NWM3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CUEDC1Q9NWM3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.14■□□□□ 0.17
CUEDC1Q9NWM3 AC079328.2-201ENST00000561241 3354 ntBASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 FAM8A3P-201ENST00000427218 844 ntBASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 AL031432.2-201ENST00000566714 459 ntBASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 AL928711.1-201ENST00000570165 459 ntBASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 AP001350.2-201ENST00000625104 1094 ntBASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CUEDC1Q9NWM3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 AL391005.1-201ENST00000623953 2435 ntBASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.12■□□□□ 0.17
CUEDC1Q9NWM3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms