Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 RHOQP3-201ENST00000437982 621 ntBASIC14.98□□□□□ -0.01
USB1Q9BQ65 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 AC023141.13-201ENST00000604991 943 ntBASIC14.98□□□□□ -0.01
USB1Q9BQ65 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.98□□□□□ -0.01
USB1Q9BQ65 TMEM14EP-202ENST00000639378 1296 ntBASIC14.98□□□□□ -0.01
USB1Q9BQ65 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
USB1Q9BQ65 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
USB1Q9BQ65 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 MKNK2P1-201ENST00000437526 628 ntBASIC14.97□□□□□ -0.01
USB1Q9BQ65 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 CXCL1P1-201ENST00000502804 216 ntBASIC14.97□□□□□ -0.01
USB1Q9BQ65 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 AC139530.3-201ENST00000620344 690 ntBASIC14.97□□□□□ -0.01
USB1Q9BQ65 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
USB1Q9BQ65 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
USB1Q9BQ65 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 GPX1P2-201ENST00000429271 606 ntBASIC14.96□□□□□ -0.01
USB1Q9BQ65 FAM185BP-201ENST00000443595 716 ntBASIC14.96□□□□□ -0.01
USB1Q9BQ65 ACTG1P14-201ENST00000446382 1122 ntBASIC14.96□□□□□ -0.01
USB1Q9BQ65 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 AL138688.1-201ENST00000624851 1594 ntBASIC14.96□□□□□ -0.01
USB1Q9BQ65 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
USB1Q9BQ65 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
USB1Q9BQ65 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
USB1Q9BQ65 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.96□□□□□ -0.02
USB1Q9BQ65 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
USB1Q9BQ65 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms