Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF4Q96M43 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 IGHV3-72-202ENST00000621503 303 ntBASIC21.72■■□□□ 1.07
NBPF4Q96M43 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF4Q96M43 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF4Q96M43 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NBPF4Q96M43 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF4Q96M43 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NBPF4Q96M43 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
NBPF4Q96M43 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC21.71■■□□□ 1.07
NBPF4Q96M43 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 SPDYE17-201ENST00000412399 783 ntBASIC21.71■■□□□ 1.07
NBPF4Q96M43 DFFBP1-201ENST00000433250 979 ntBASIC21.71■■□□□ 1.07
NBPF4Q96M43 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.71■■□□□ 1.07
NBPF4Q96M43 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
NBPF4Q96M43 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC21.71■■□□□ 1.07
NBPF4Q96M43 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.71■■□□□ 1.07
NBPF4Q96M43 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC21.71■■□□□ 1.07
NBPF4Q96M43 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
NBPF4Q96M43 KRT8P12-202ENST00000472924 1397 ntBASIC21.71■■□□□ 1.07
NBPF4Q96M43 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.71■■□□□ 1.07
NBPF4Q96M43 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NBPF4Q96M43 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
NBPF4Q96M43 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 ARSEP1-201ENST00000420443 635 ntBASIC21.7■■□□□ 1.06
NBPF4Q96M43 AC114501.2-201ENST00000439631 535 ntBASIC21.7■■□□□ 1.06
NBPF4Q96M43 KRT17P7-201ENST00000451704 1104 ntBASIC21.7■■□□□ 1.06
NBPF4Q96M43 DOC2GP-202ENST00000514950 1163 ntBASIC21.7■■□□□ 1.06
NBPF4Q96M43 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 WASH4P-201ENST00000564273 1246 ntBASIC21.7■■□□□ 1.06
NBPF4Q96M43 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 IMPDH1P4-201ENST00000445028 1534 ntBASIC21.7■■□□□ 1.06
NBPF4Q96M43 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC21.7■■□□□ 1.06
NBPF4Q96M43 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF4Q96M43 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF4Q96M43 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF4Q96M43 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF4Q96M43 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF4Q96M43 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF4Q96M43 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF4Q96M43 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 AC024267.1-201ENST00000582320 895 ntBASIC21.69■■□□□ 1.06
NBPF4Q96M43 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF4Q96M43 AC020765.3-201ENST00000613051 740 ntBASIC21.69■■□□□ 1.06
NBPF4Q96M43 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 AL033527.5-202ENST00000641632 1098 ntBASIC21.69■■□□□ 1.06
NBPF4Q96M43 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF4Q96M43 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF4Q96M43 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.69■■□□□ 1.06
NBPF4Q96M43 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF4Q96M43 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF4Q96M43 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF4Q96M43 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.68■■□□□ 1.06
NBPF4Q96M43 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms