Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 AC013467.2-201ENST00000605472 835 ntBASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 BICD1-207ENST00000551848 1962 ntBASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM43Q96BQ3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 AC108725.1-201ENST00000495472 409 ntBASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 AC104596.2-201ENST00000512793 793 ntBASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 TIMM17BP1-201ENST00000545713 516 ntBASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 AC103810.3-201ENST00000583567 96 ntBASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM43Q96BQ3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 CSF2RBP1-201ENST00000447905 391 ntBASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 AC099548.2-209ENST00000480264 625 ntBASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 RNA5SP412-201ENST00000516234 123 ntBASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 AC074044.1-201ENST00000609673 707 ntBASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM43Q96BQ3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM43Q96BQ3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms