Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SHC3Q92529 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 AC007967.2-201ENST00000432613 625 ntBASIC17.74■□□□□ 0.43
SHC3Q92529 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.74■□□□□ 0.43
SHC3Q92529 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.74■□□□□ 0.43
SHC3Q92529 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 AC018845.2-201ENST00000568326 409 ntBASIC17.74■□□□□ 0.43
SHC3Q92529 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.74■□□□□ 0.43
SHC3Q92529 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.74■□□□□ 0.43
SHC3Q92529 AC004877.2-201ENST00000623941 599 ntBASIC17.74■□□□□ 0.43
SHC3Q92529 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.74■□□□□ 0.43
SHC3Q92529 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SHC3Q92529 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.74■□□□□ 0.43
SHC3Q92529 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHC3Q92529 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SHC3Q92529 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SHC3Q92529 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
SHC3Q92529 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 AC025580.3-201ENST00000617932 1424 ntBASIC17.73■□□□□ 0.43
SHC3Q92529 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.73■□□□□ 0.43
SHC3Q92529 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC3Q92529 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SHC3Q92529 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC3Q92529 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC3Q92529 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC3Q92529 AC026396.1-201ENST00000419388 421 ntBASIC17.73■□□□□ 0.43
SHC3Q92529 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.73■□□□□ 0.43
SHC3Q92529 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.73■□□□□ 0.43
SHC3Q92529 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.73■□□□□ 0.43
SHC3Q92529 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
SHC3Q92529 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.73■□□□□ 0.43
SHC3Q92529 KRT19P2-202ENST00000557173 1012 ntBASIC17.73■□□□□ 0.43
SHC3Q92529 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.73■□□□□ 0.43
SHC3Q92529 AL009183.1-201ENST00000603760 355 ntBASIC17.73■□□□□ 0.43
SHC3Q92529 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SHC3Q92529 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC3Q92529 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
SHC3Q92529 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.73■□□□□ 0.43
SHC3Q92529 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.73■□□□□ 0.43
SHC3Q92529 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SHC3Q92529 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SHC3Q92529 BCAR1-209ENST00000546196 1340 ntBASIC17.72■□□□□ 0.43
SHC3Q92529 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.72■□□□□ 0.43
SHC3Q92529 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHC3Q92529 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SHC3Q92529 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SHC3Q92529 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
SHC3Q92529 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SHC3Q92529 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.72■□□□□ 0.43
SHC3Q92529 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SHC3Q92529 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 AC140658.5-201ENST00000438532 169 ntBASIC17.72■□□□□ 0.43
SHC3Q92529 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SHC3Q92529 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.72■□□□□ 0.43
SHC3Q92529 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.72■□□□□ 0.43
SHC3Q92529 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.72■□□□□ 0.43
SHC3Q92529 AC120114.3-201ENST00000611923 658 ntBASIC17.72■□□□□ 0.43
SHC3Q92529 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.72■□□□□ 0.43
SHC3Q92529 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHC3Q92529 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHC3Q92529 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms