Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01561Q8N1V8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 SNX33P1-201ENST00000592116 1762 ntBASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 RCN1P1-201ENST00000400413 996 ntBASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 TPSP2-201ENST00000561760 610 ntBASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 AC020765.3-201ENST00000613051 740 ntBASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 AL603832.2-201ENST00000566195 2125 ntBASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01561Q8N1V8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 MIR648-201ENST00000385046 94 ntBASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC01561Q8N1V8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms