Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 COX11-210ENST00000639671 696 ntBASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 BNIP3P42-201ENST00000454982 569 ntBASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 BNIP3P29-201ENST00000598302 571 ntBASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 MIR8072-201ENST00000614241 80 ntBASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AC011447.5-201ENST00000616168 564 ntBASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 RARRES2P5-201ENST00000564013 466 ntBASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 BRI3BPP1-201ENST00000594224 787 ntBASIC15.4■□□□□ 0.06
COL27A1Q8IZC6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 CDC14C-201ENST00000428251 1719 ntBASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 AC018665.1-201ENST00000622927 1362 ntBASIC15.39■□□□□ 0.05
COL27A1Q8IZC6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 MIR5189-201ENST00000577370 114 ntBASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 AC015936.2-201ENST00000593177 259 ntBASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms