Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDKL3Q8IVW4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 PCDH8P1-201ENST00000428983 2773 ntBASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 GPAA1P2-202ENST00000606848 1787 ntBASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 AC079781.3-201ENST00000449110 356 ntBASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 RN7SL510P-201ENST00000581311 263 ntBASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.13■□□□□ 0.33
CDKL3Q8IVW4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 AC010654.1-201ENST00000615722 808 ntBASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 AC004790.2-201ENST00000623588 572 ntBASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 AC117500.6-201ENST00000624871 588 ntBASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 PCGF3-213ENST00000620529 1899 ntBASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKL3Q8IVW4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKL3Q8IVW4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms