Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.12□□□□□ -0.63
SCXQ7RTU7 KRT18P27-201ENST00000427733 1299 ntBASIC11.12□□□□□ -0.63
SCXQ7RTU7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC108751.1-201ENST00000490852 363 ntBASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC040169.1-201ENST00000565382 521 ntBASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC010327.4-202ENST00000591484 748 ntBASIC11.12□□□□□ -0.63
SCXQ7RTU7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC132872.4-202ENST00000622924 2756 ntBASIC11.12□□□□□ -0.63
SCXQ7RTU7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AL353593.2-201ENST00000602529 1483 ntBASIC11.12□□□□□ -0.63
SCXQ7RTU7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SCXQ7RTU7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SCXQ7RTU7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 AC093677.2-201ENST00000600169 1863 ntBASIC11.11□□□□□ -0.63
SCXQ7RTU7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 AC100803.2-201ENST00000562459 1963 ntBASIC11.11□□□□□ -0.63
SCXQ7RTU7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 ELK2BP-201ENST00000415014 1224 ntBASIC11.11□□□□□ -0.63
SCXQ7RTU7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 PRYP5-201ENST00000451909 266 ntBASIC11.11□□□□□ -0.63
SCXQ7RTU7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 AL691403.2-201ENST00000618460 490 ntBASIC11.11□□□□□ -0.63
SCXQ7RTU7 AL589182.2-201ENST00000619332 1049 ntBASIC11.11□□□□□ -0.63
SCXQ7RTU7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 AC132938.5-201ENST00000624980 1813 ntBASIC11.11□□□□□ -0.63
SCXQ7RTU7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCXQ7RTU7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SCXQ7RTU7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms