Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 AL035456.1-201ENST00000456064 1369 ntBASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
OTOP1Q7RTM1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 RPL37AP1-201ENST00000412502 279 ntBASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 AC105233.2-201ENST00000523697 349 ntBASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 AF228730.5-201ENST00000530288 346 ntBASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 AP001094.4-201ENST00000579008 2176 ntBASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
OTOP1Q7RTM1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
OTOP1Q7RTM1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
OTOP1Q7RTM1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
OTOP1Q7RTM1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 RN7SL837P-201ENST00000463010 287 ntBASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 AC099568.2-201ENST00000609194 695 ntBASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 CETN4P-206ENST00000642099 2168 ntBASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
OTOP1Q7RTM1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
OTOP1Q7RTM1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
OTOP1Q7RTM1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
OTOP1Q7RTM1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
OTOP1Q7RTM1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
OTOP1Q7RTM1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
OTOP1Q7RTM1 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.13■□□□□ 0.65
OTOP1Q7RTM1 TTTY23B-201ENST00000442790 549 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms