Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 HLA-A-202ENST00000376806 1854 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 AKR1C7P-201ENST00000305623 895 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 PTCHD3P3-201ENST00000403073 906 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 HLA-J-202ENST00000469281 1241 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 AF238378.1-201ENST00000526806 358 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 OR7E14P-202ENST00000530490 1290 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 AC021087.4-201ENST00000563761 564 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 GGTLC5P-201ENST00000617623 998 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 MIR1199-201ENST00000621445 119 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 AC012313.10-201ENST00000623509 926 ntBASIC11.07□□□□□ -0.64
SYCNQ0VAF6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
SYCNQ0VAF6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 ELK2BP-201ENST00000415014 1224 ntBASIC11.06□□□□□ -0.64
SYCNQ0VAF6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 PAWRP1-201ENST00000451083 565 ntBASIC11.06□□□□□ -0.64
SYCNQ0VAF6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 AC013467.2-201ENST00000605472 835 ntBASIC11.06□□□□□ -0.64
SYCNQ0VAF6 AC025062.2-201ENST00000605477 670 ntBASIC11.06□□□□□ -0.64
SYCNQ0VAF6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 AL805961.1-202ENST00000641562 540 ntBASIC11.06□□□□□ -0.64
SYCNQ0VAF6 AC107918.4-202ENST00000641623 219 ntBASIC11.06□□□□□ -0.64
SYCNQ0VAF6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SYCNQ0VAF6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms