Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15□□□□□ -0.01
VBP1P61758 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VBP1P61758 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15□□□□□ -0.01
VBP1P61758 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15□□□□□ -0.01
VBP1P61758 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
VBP1P61758 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
VBP1P61758 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VBP1P61758 AC136621.1-201ENST00000624017 2304 ntBASIC14.99□□□□□ -0.01
VBP1P61758 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VBP1P61758 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.99□□□□□ -0.01
VBP1P61758 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.99□□□□□ -0.01
VBP1P61758 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 AL355802.2-201ENST00000402069 882 ntBASIC14.99□□□□□ -0.01
VBP1P61758 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.99□□□□□ -0.01
VBP1P61758 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.99□□□□□ -0.01
VBP1P61758 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.99□□□□□ -0.01
VBP1P61758 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 REXO1L10P-201ENST00000615707 1290 ntBASIC14.99□□□□□ -0.01
VBP1P61758 REXO1L12P-201ENST00000622156 912 ntBASIC14.99□□□□□ -0.01
VBP1P61758 AC073648.6-201ENST00000641589 218 ntBASIC14.99□□□□□ -0.01
VBP1P61758 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 GGT3P-204ENST00000453783 1664 ntBASIC14.99□□□□□ -0.01
VBP1P61758 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.99□□□□□ -0.01
VBP1P61758 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
VBP1P61758 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.99□□□□□ -0.01
VBP1P61758 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VBP1P61758 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.98□□□□□ -0.01
VBP1P61758 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.98□□□□□ -0.01
VBP1P61758 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VBP1P61758 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.98□□□□□ -0.01
VBP1P61758 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VBP1P61758 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VBP1P61758 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
VBP1P61758 ESRRAP1-201ENST00000400596 1257 ntBASIC14.98□□□□□ -0.01
VBP1P61758 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.98□□□□□ -0.01
VBP1P61758 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
VBP1P61758 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.98□□□□□ -0.01
VBP1P61758 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.98□□□□□ -0.01
VBP1P61758 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.98□□□□□ -0.01
VBP1P61758 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.98□□□□□ -0.01
VBP1P61758 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.98□□□□□ -0.01
VBP1P61758 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.98□□□□□ -0.01
VBP1P61758 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.98□□□□□ -0.01
VBP1P61758 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VBP1P61758 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VBP1P61758 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.97□□□□□ -0.01
VBP1P61758 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VBP1P61758 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VBP1P61758 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms