Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AC233702.3-201ENST00000578656 1387 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AC096633.1-201ENST00000422446 749 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 TOB2P1-201ENST00000469761 992 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AC091607.1-201ENST00000490318 1060 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AP005901.3-202ENST00000581653 237 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AC005336.2-201ENST00000593183 939 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AC092119.3-201ENST00000612618 583 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 NFIC-211ENST00000641145 8399 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AC092053.1-201ENST00000605787 1936 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 GRK6P1-201ENST00000400595 1711 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.19■□□□□ 0.18
LINGO3P0C6S8 AC097374.2-201ENST00000618617 1306 ntBASIC16.19■□□□□ 0.18
LINGO3P0C6S8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 AC005089.1-201ENST00000619486 2241 ntBASIC16.18■□□□□ 0.18
LINGO3P0C6S8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 MTHFR-217ENST00000641820 1569 ntBASIC16.18■□□□□ 0.18
LINGO3P0C6S8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 VENTXP7-201ENST00000475503 772 ntBASIC16.18■□□□□ 0.18
LINGO3P0C6S8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINGO3P0C6S8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINGO3P0C6S8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms