Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.24■□□□□ 0.51
CLTAP09496 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLTAP09496 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLTAP09496 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLTAP09496 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.23■□□□□ 0.51
CLTAP09496 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 AC106886.4-201ENST00000623557 2502 ntBASIC18.23■□□□□ 0.51
CLTAP09496 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLTAP09496 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.23■□□□□ 0.51
CLTAP09496 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
CLTAP09496 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLTAP09496 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLTAP09496 RNU1-129P-201ENST00000384064 167 ntBASIC18.23■□□□□ 0.51
CLTAP09496 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.23■□□□□ 0.51
CLTAP09496 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.23■□□□□ 0.51
CLTAP09496 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.23■□□□□ 0.51
CLTAP09496 CEND1P1-201ENST00000451006 455 ntBASIC18.23■□□□□ 0.51
CLTAP09496 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.23■□□□□ 0.51
CLTAP09496 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.23■□□□□ 0.51
CLTAP09496 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.23■□□□□ 0.51
CLTAP09496 U1.21-201ENST00000580816 167 ntBASIC18.23■□□□□ 0.51
CLTAP09496 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.23■□□□□ 0.51
CLTAP09496 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.23■□□□□ 0.51
CLTAP09496 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLTAP09496 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLTAP09496 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CLTAP09496 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLTAP09496 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.22■□□□□ 0.51
CLTAP09496 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
CLTAP09496 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.22■□□□□ 0.51
CLTAP09496 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CLTAP09496 AC211486.1-202ENST00000416371 468 ntBASIC18.22■□□□□ 0.51
CLTAP09496 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CLTAP09496 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.22■□□□□ 0.51
CLTAP09496 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.22■□□□□ 0.51
CLTAP09496 AC004967.1-201ENST00000453589 447 ntBASIC18.22■□□□□ 0.51
CLTAP09496 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 AC211476.1-201ENST00000503899 468 ntBASIC18.22■□□□□ 0.51
CLTAP09496 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLTAP09496 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.22■□□□□ 0.51
CLTAP09496 AC109635.5-201ENST00000533593 962 ntBASIC18.22■□□□□ 0.51
CLTAP09496 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.22■□□□□ 0.51
CLTAP09496 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 MIR3909-201ENST00000579518 119 ntBASIC18.22■□□□□ 0.51
CLTAP09496 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.22■□□□□ 0.51
CLTAP09496 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.22■□□□□ 0.51
CLTAP09496 AL009183.1-201ENST00000603760 355 ntBASIC18.22■□□□□ 0.51
CLTAP09496 AL031055.1-201ENST00000606362 631 ntBASIC18.22■□□□□ 0.51
CLTAP09496 AL691403.2-201ENST00000618460 490 ntBASIC18.22■□□□□ 0.51
CLTAP09496 AC134684.3-201ENST00000641758 218 ntBASIC18.22■□□□□ 0.51
CLTAP09496 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.22■□□□□ 0.51
CLTAP09496 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLTAP09496 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.22■□□□□ 0.51
CLTAP09496 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.22■□□□□ 0.51
CLTAP09496 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CLTAP09496 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CLTAP09496 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLTAP09496 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms