Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDH7O60245 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
PCDH7O60245 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
PCDH7O60245 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 AC008894.3-201ENST00000624324 3103 ntBASIC15.95■□□□□ 0.14
PCDH7O60245 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.95■□□□□ 0.14
PCDH7O60245 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH7O60245 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
PCDH7O60245 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH7O60245 AL031731.1-201ENST00000642131 2094 ntBASIC15.95■□□□□ 0.14
PCDH7O60245 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH7O60245 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH7O60245 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDH7O60245 HCG4-201ENST00000418983 998 ntBASIC15.94■□□□□ 0.14
PCDH7O60245 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH7O60245 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDH7O60245 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDH7O60245 AL773604.1-201ENST00000617417 272 ntBASIC15.94■□□□□ 0.14
PCDH7O60245 AC117500.6-201ENST00000624871 588 ntBASIC15.94■□□□□ 0.14
PCDH7O60245 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDH7O60245 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH7O60245 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH7O60245 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 GGT4P-201ENST00000623672 1708 ntBASIC15.94■□□□□ 0.14
PCDH7O60245 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH7O60245 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDH7O60245 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH7O60245 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
PCDH7O60245 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH7O60245 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 AC092910.1-201ENST00000482027 1129 ntBASIC15.93■□□□□ 0.14
PCDH7O60245 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDH7O60245 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 AC004790.2-201ENST00000623588 572 ntBASIC15.93■□□□□ 0.14
PCDH7O60245 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 AC026691.1-201ENST00000602502 2017 ntBASIC15.93■□□□□ 0.14
PCDH7O60245 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH7O60245 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH7O60245 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH7O60245 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDH7O60245 AL391005.1-201ENST00000623953 2435 ntBASIC15.93■□□□□ 0.14
PCDH7O60245 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH7O60245 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDH7O60245 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms