Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.97□□□□□ -0.33
PDE6DO43924 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
PDE6DO43924 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.97□□□□□ -0.33
PDE6DO43924 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
PDE6DO43924 AC112504.1-201ENST00000623415 1841 ntBASIC12.97□□□□□ -0.33
PDE6DO43924 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PDE6DO43924 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.96□□□□□ -0.33
PDE6DO43924 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.96□□□□□ -0.33
PDE6DO43924 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
PDE6DO43924 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
PDE6DO43924 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
PDE6DO43924 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.96□□□□□ -0.33
PDE6DO43924 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.96□□□□□ -0.33
PDE6DO43924 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.96□□□□□ -0.33
PDE6DO43924 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.96□□□□□ -0.33
PDE6DO43924 AC122714.2-201ENST00000502787 707 ntBASIC12.96□□□□□ -0.33
PDE6DO43924 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.96□□□□□ -0.33
PDE6DO43924 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.96□□□□□ -0.33
PDE6DO43924 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.96□□□□□ -0.33
PDE6DO43924 C2orf69P3-201ENST00000565542 1120 ntBASIC12.96□□□□□ -0.33
PDE6DO43924 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.96□□□□□ -0.33
PDE6DO43924 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PDE6DO43924 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
PDE6DO43924 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.96□□□□□ -0.33
PDE6DO43924 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.96□□□□□ -0.34
PDE6DO43924 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.96□□□□□ -0.34
PDE6DO43924 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
PDE6DO43924 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.96□□□□□ -0.34
PDE6DO43924 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.96□□□□□ -0.34
PDE6DO43924 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.96□□□□□ -0.34
PDE6DO43924 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PDE6DO43924 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
PDE6DO43924 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 AC138969.2-201ENST00000532739 9932 ntBASIC12.95□□□□□ -0.34
PDE6DO43924 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.95□□□□□ -0.34
PDE6DO43924 AL049757.1-201ENST00000616842 1596 ntBASIC12.95□□□□□ -0.34
PDE6DO43924 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.95□□□□□ -0.34
PDE6DO43924 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 AP003733.1-201ENST00000491725 852 ntBASIC12.95□□□□□ -0.34
PDE6DO43924 AC107956.1-201ENST00000494359 873 ntBASIC12.95□□□□□ -0.34
PDE6DO43924 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.95□□□□□ -0.34
PDE6DO43924 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.95□□□□□ -0.34
PDE6DO43924 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PDE6DO43924 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms