Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 POM121L3P-201ENST00000419331 1163 ntBASIC17.37■□□□□ 0.37
CCDC188H7C350 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC188H7C350 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC188H7C350 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC188H7C350 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC188H7C350 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC188H7C350 MPDU1-223ENST00000582151 728 ntBASIC17.37■□□□□ 0.37
CCDC188H7C350 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC188H7C350 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CCDC188H7C350 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC188H7C350 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC188H7C350 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC188H7C350 CDC14C-201ENST00000428251 1719 ntBASIC17.37■□□□□ 0.37
CCDC188H7C350 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC188H7C350 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC188H7C350 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC188H7C350 KRT18P1-202ENST00000452408 1331 ntBASIC17.37■□□□□ 0.37
CCDC188H7C350 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC188H7C350 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC188H7C350 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC188H7C350 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC188H7C350 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC188H7C350 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC188H7C350 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC188H7C350 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC188H7C350 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CCDC188H7C350 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC188H7C350 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.36■□□□□ 0.37
CCDC188H7C350 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC188H7C350 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC188H7C350 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC188H7C350 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC188H7C350 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCDC188H7C350 IGHV3-47-201ENST00000425060 335 ntBASIC17.36■□□□□ 0.37
CCDC188H7C350 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 PRYP5-201ENST00000451909 266 ntBASIC17.36■□□□□ 0.37
CCDC188H7C350 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC188H7C350 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC188H7C350 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCDC188H7C350 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
CCDC188H7C350 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC188H7C350 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC188H7C350 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC188H7C350 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC188H7C350 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 GPAA1P2-202ENST00000606848 1787 ntBASIC17.35■□□□□ 0.37
CCDC188H7C350 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 AC112504.1-201ENST00000623415 1841 ntBASIC17.35■□□□□ 0.37
CCDC188H7C350 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC188H7C350 REXO1L8P-201ENST00000604378 1897 ntBASIC17.35■□□□□ 0.37
CCDC188H7C350 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 AL356309.3-201ENST00000624132 1934 ntBASIC17.35■□□□□ 0.37
CCDC188H7C350 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC188H7C350 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 LINC02447-202ENST00000501888 2146 ntBASIC17.35■□□□□ 0.37
CCDC188H7C350 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC188H7C350 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC188H7C350 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC188H7C350 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC188H7C350 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 TPSP2-201ENST00000561760 610 ntBASIC17.35■□□□□ 0.37
CCDC188H7C350 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC188H7C350 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC188H7C350 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC188H7C350 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC188H7C350 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC188H7C350 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC188H7C350 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC188H7C350 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC188H7C350 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms