Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 MIR940-201ENST00000401276 94 ntBASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC068137.2-201ENST00000605408 478 ntBASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC196A0A1B0GTZ2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC092474.2-201ENST00000424288 719 ntBASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 AL513190.1-201ENST00000621254 727 ntBASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC092865.6-201ENST00000642101 219 ntBASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 AL118508.1-201ENST00000613502 2345 ntBASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC196A0A1B0GTZ2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 AL391005.1-201ENST00000623953 2435 ntBASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 LINC01144-201ENST00000626198 1710 ntBASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCDC196A0A1B0GTZ2 AC002347.1-201ENST00000569543 541 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms