Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.33■□□□□ 0.21
TRBV5-4A0A0C4DH59 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 YBX1P5-201ENST00000509441 847 ntBASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 FAM86C2P-203ENST00000528684 1004 ntBASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 AL135744.1-201ENST00000565098 629 ntBASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC073439.1-201ENST00000624121 1774 ntBASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-4A0A0C4DH59 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 TFAMP1-201ENST00000412727 736 ntBASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 BX842568.4-201ENST00000421222 227 ntBASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC073389.1-201ENST00000595595 795 ntBASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 AC005622.1-201ENST00000636801 1703 ntBASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRBV5-4A0A0C4DH59 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 ELL2P1-201ENST00000413990 1906 ntBASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 GPX1P2-201ENST00000429271 606 ntBASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
TRBV5-4A0A0C4DH59 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms