Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 AC026396.1-201ENST00000419388 421 ntBASIC13.57□□□□□ -0.24
NKX6-2Q9C056 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 LINC01101-201ENST00000622953 1884 ntBASIC13.57□□□□□ -0.24
NKX6-2Q9C056 AC126335.2-201ENST00000623362 4637 ntBASIC13.57□□□□□ -0.24
NKX6-2Q9C056 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 ME2P1-201ENST00000426028 1970 ntBASIC13.56□□□□□ -0.24
NKX6-2Q9C056 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 MYO15B-237ENST00000642007 4893 ntBASIC13.56□□□□□ -0.24
NKX6-2Q9C056 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 RPS15-203ENST00000586096 570 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.56□□□□□ -0.24
NKX6-2Q9C056 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 AC010327.5-201ENST00000586923 3061 ntBASIC13.56□□□□□ -0.24
NKX6-2Q9C056 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 AC093525.9-201ENST00000624961 1746 ntBASIC13.56□□□□□ -0.24
NKX6-2Q9C056 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 LINC01311-201ENST00000565162 1445 ntBASIC13.56□□□□□ -0.24
NKX6-2Q9C056 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NKX6-2Q9C056 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NKX6-2Q9C056 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms