Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 AL512652.2-201ENST00000625156 1716 ntBASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 HMGA1P7-201ENST00000406908 502 ntBASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 KRT18P2-201ENST00000447938 1258 ntBASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 KRT18P3-201ENST00000451602 1288 ntBASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 FAM197Y3-203ENST00000618346 717 ntBASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATPAF2Q8N5M1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 AL031055.1-201ENST00000606362 631 ntBASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 AC004877.2-201ENST00000623941 599 ntBASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 AC079328.2-201ENST00000561241 3354 ntBASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.1■□□□□ 0.33
ATPAF2Q8N5M1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 RNU1-129P-201ENST00000384064 167 ntBASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 KRT19P2-202ENST00000557173 1012 ntBASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 U1.21-201ENST00000580816 167 ntBASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 AC025580.3-201ENST00000617932 1424 ntBASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 AL031731.1-201ENST00000642131 2094 ntBASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ATPAF2Q8N5M1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATPAF2Q8N5M1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms