Protein–RNA interactions for Protein: Q86TJ5

ZNF554, Zinc finger protein 554, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554Q86TJ5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 LINC02012-201ENST00000608206 1725 ntBASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.16■□□□□ 0.02
ZNF554Q86TJ5 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 MIR600HG-201ENST00000449175 5984 ntBASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF554Q86TJ5 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 AP000523.1-201ENST00000398242 1049 ntBASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 SNORA78-201ENST00000459373 127 ntBASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 AL355075.4-201ENST00000554988 638 ntBASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 MIR4497-201ENST00000583208 89 ntBASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 LINC01451-201ENST00000623792 534 ntBASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF554Q86TJ5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF554Q86TJ5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF554Q86TJ5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF554Q86TJ5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms