Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13DQ5THJ4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 AC004461.2-201ENST00000629517 803 ntBASIC11□□□□□ -0.65
VPS13DQ5THJ4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 IMPDH1P4-201ENST00000445028 1534 ntBASIC11□□□□□ -0.65
VPS13DQ5THJ4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 AL391256.1-201ENST00000443260 1855 ntBASIC11□□□□□ -0.65
VPS13DQ5THJ4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 ACTBP11-201ENST00000436287 1126 ntBASIC11□□□□□ -0.65
VPS13DQ5THJ4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 CD74-212ENST00000524315 584 ntTSL 5 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 AP005482.1-201ENST00000563722 1273 ntBASIC11□□□□□ -0.65
VPS13DQ5THJ4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 AC068880.1-201ENST00000507289 2297 ntBASIC11□□□□□ -0.65
VPS13DQ5THJ4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 RARRES2P5-201ENST00000564013 466 ntBASIC11□□□□□ -0.65
VPS13DQ5THJ4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 AL162726.2-201ENST00000438986 1017 ntBASIC11□□□□□ -0.65
VPS13DQ5THJ4 SERBP1P3-201ENST00000459980 809 ntBASIC11□□□□□ -0.65
VPS13DQ5THJ4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13DQ5THJ4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC11□□□□□ -0.65
VPS13DQ5THJ4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC10.99□□□□□ -0.65
VPS13DQ5THJ4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms