Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 AC106872.11-201ENST00000605838 421 ntBASIC21.19■□□□□ 0.98
NUP188Q5SRE5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NUP188Q5SRE5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 AC006033.1-201ENST00000440505 426 ntBASIC21.18■□□□□ 0.98
NUP188Q5SRE5 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 AL033527.5-201ENST00000641382 801 ntBASIC21.18■□□□□ 0.98
NUP188Q5SRE5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 MEP1AP4-201ENST00000423244 1087 ntBASIC21.18■□□□□ 0.98
NUP188Q5SRE5 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NUP188Q5SRE5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 AC092053.1-201ENST00000605787 1936 ntBASIC21.17■□□□□ 0.98
NUP188Q5SRE5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.17■□□□□ 0.98
NUP188Q5SRE5 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 PFN1P12-201ENST00000455938 534 ntBASIC21.17■□□□□ 0.98
NUP188Q5SRE5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 TUBB8P12-201ENST00000308911 1335 ntBASIC21.17■□□□□ 0.98
NUP188Q5SRE5 TUBB7P-202ENST00000428444 1305 ntBASIC21.17■□□□□ 0.98
NUP188Q5SRE5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 TUBB8P7-204ENST00000567960 1332 ntBASIC21.17■□□□□ 0.98
NUP188Q5SRE5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.17■□□□□ 0.98
NUP188Q5SRE5 AC007613.1-201ENST00000572811 2597 ntBASIC21.16■□□□□ 0.98
NUP188Q5SRE5 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC21.16■□□□□ 0.98
NUP188Q5SRE5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms