Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PTPN20Q4JDL3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 PKD1P1-201ENST00000458669 6805 ntBASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 MIR940-201ENST00000401276 94 ntBASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 AC140658.5-201ENST00000438532 169 ntBASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 AC109635.5-201ENST00000533593 962 ntBASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 AL009183.1-201ENST00000603760 355 ntBASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN20Q4JDL3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 PCGF3-213ENST00000620529 1899 ntBASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 PMS2P4-201ENST00000412466 1052 ntBASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 POLD2P1-201ENST00000511220 997 ntBASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 PGAM5P1-201ENST00000518923 814 ntBASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 AC021097.1-201ENST00000607902 574 ntBASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN20Q4JDL3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.52■□□□□ 0.39
PTPN20Q4JDL3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 AC023274.1-201ENST00000418278 595 ntBASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 KRT18P58-201ENST00000527480 1120 ntBASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.51■□□□□ 0.39
PTPN20Q4JDL3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms