Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ATXN3P54252 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATXN3P54252 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.11■□□□□ 0.33
ATXN3P54252 DUTP2-201ENST00000519164 463 ntBASIC17.11■□□□□ 0.33
ATXN3P54252 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.11■□□□□ 0.33
ATXN3P54252 AC068137.2-201ENST00000605408 478 ntBASIC17.11■□□□□ 0.33
ATXN3P54252 AL513210.1-201ENST00000629608 234 ntBASIC17.11■□□□□ 0.33
ATXN3P54252 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATXN3P54252 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.11■□□□□ 0.33
ATXN3P54252 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.11■□□□□ 0.33
ATXN3P54252 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ATXN3P54252 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.11■□□□□ 0.33
ATXN3P54252 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ATXN3P54252 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 AL138688.1-201ENST00000624851 1594 ntBASIC17.11■□□□□ 0.33
ATXN3P54252 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATXN3P54252 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.11■□□□□ 0.33
ATXN3P54252 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.1■□□□□ 0.33
ATXN3P54252 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ATXN3P54252 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.1■□□□□ 0.33
ATXN3P54252 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.1■□□□□ 0.33
ATXN3P54252 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.1■□□□□ 0.33
ATXN3P54252 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.1■□□□□ 0.33
ATXN3P54252 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ATXN3P54252 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.1■□□□□ 0.33
ATXN3P54252 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.1■□□□□ 0.33
ATXN3P54252 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.1■□□□□ 0.33
ATXN3P54252 AC004461.1-201ENST00000412461 403 ntBASIC17.1■□□□□ 0.33
ATXN3P54252 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.1■□□□□ 0.33
ATXN3P54252 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.1■□□□□ 0.33
ATXN3P54252 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.1■□□□□ 0.33
ATXN3P54252 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.1■□□□□ 0.33
ATXN3P54252 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.1■□□□□ 0.33
ATXN3P54252 REXO1L3P-201ENST00000622202 1288 ntBASIC17.1■□□□□ 0.33
ATXN3P54252 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATXN3P54252 NFIC-211ENST00000641145 8399 ntBASIC17.1■□□□□ 0.33
ATXN3P54252 AC105020.1-201ENST00000435356 2205 ntBASIC17.1■□□□□ 0.33
ATXN3P54252 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.1■□□□□ 0.33
ATXN3P54252 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ATXN3P54252 AC133963.1-201ENST00000504166 1679 ntBASIC17.1■□□□□ 0.33
ATXN3P54252 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATXN3P54252 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ATXN3P54252 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.09■□□□□ 0.33
ATXN3P54252 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 LINC02199-201ENST00000506655 2702 ntBASIC17.09■□□□□ 0.33
ATXN3P54252 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATXN3P54252 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms