Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.61■□□□□ 0.25
NUBP1P53384 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.61■□□□□ 0.25
NUBP1P53384 AP000547.1-201ENST00000454360 617 ntBASIC16.61■□□□□ 0.25
NUBP1P53384 USP32P1-208ENST00000506594 1164 ntBASIC16.61■□□□□ 0.25
NUBP1P53384 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC16.61■□□□□ 0.25
NUBP1P53384 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC16.61■□□□□ 0.25
NUBP1P53384 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC16.61■□□□□ 0.25
NUBP1P53384 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NUBP1P53384 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.61■□□□□ 0.25
NUBP1P53384 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.61■□□□□ 0.25
NUBP1P53384 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.61■□□□□ 0.25
NUBP1P53384 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NUBP1P53384 AC023310.3-201ENST00000557027 670 ntBASIC16.61■□□□□ 0.25
NUBP1P53384 AC100756.1-201ENST00000562736 682 ntBASIC16.61■□□□□ 0.25
NUBP1P53384 AC138749.3-201ENST00000567691 622 ntBASIC16.61■□□□□ 0.25
NUBP1P53384 MIR3615-201ENST00000581999 87 ntBASIC16.61■□□□□ 0.25
NUBP1P53384 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.61■□□□□ 0.25
NUBP1P53384 AC116165.1-201ENST00000611806 668 ntBASIC16.61■□□□□ 0.25
NUBP1P53384 AC020923.1-201ENST00000624021 917 ntBASIC16.61■□□□□ 0.25
NUBP1P53384 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NUBP1P53384 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.6■□□□□ 0.25
NUBP1P53384 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.6■□□□□ 0.25
NUBP1P53384 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.6■□□□□ 0.25
NUBP1P53384 SNORA72.3-201ENST00000365074 132 ntBASIC16.6■□□□□ 0.25
NUBP1P53384 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.6■□□□□ 0.25
NUBP1P53384 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.6■□□□□ 0.25
NUBP1P53384 MIR1247-201ENST00000408206 136 ntBASIC16.6■□□□□ 0.25
NUBP1P53384 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.6■□□□□ 0.25
NUBP1P53384 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.6■□□□□ 0.25
NUBP1P53384 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC16.6■□□□□ 0.25
NUBP1P53384 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.6■□□□□ 0.25
NUBP1P53384 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.6■□□□□ 0.25
NUBP1P53384 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.6■□□□□ 0.25
NUBP1P53384 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC16.6■□□□□ 0.25
NUBP1P53384 SPDYE18-201ENST00000510091 1050 ntBASIC16.6■□□□□ 0.25
NUBP1P53384 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC16.6■□□□□ 0.25
NUBP1P53384 AC104596.2-201ENST00000512793 793 ntBASIC16.6■□□□□ 0.25
NUBP1P53384 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NUBP1P53384 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.6■□□□□ 0.25
NUBP1P53384 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NUBP1P53384 AC010319.3-201ENST00000597028 470 ntBASIC16.6■□□□□ 0.25
NUBP1P53384 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.6■□□□□ 0.25
NUBP1P53384 MIR6727-201ENST00000620702 65 ntBASIC16.6■□□□□ 0.25
NUBP1P53384 AL033527.5-202ENST00000641632 1098 ntBASIC16.6■□□□□ 0.25
NUBP1P53384 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.6■□□□□ 0.25
NUBP1P53384 AC093525.8-201ENST00000624099 1342 ntBASIC16.6■□□□□ 0.25
NUBP1P53384 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NUBP1P53384 AC093915.1-201ENST00000605740 1543 ntBASIC16.6■□□□□ 0.25
NUBP1P53384 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.6■□□□□ 0.25
NUBP1P53384 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NUBP1P53384 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NUBP1P53384 LINC00895-201ENST00000629028 1637 ntBASIC16.59■□□□□ 0.25
NUBP1P53384 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
NUBP1P53384 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.59■□□□□ 0.25
NUBP1P53384 AC131009.4-201ENST00000624048 1740 ntBASIC16.59■□□□□ 0.25
NUBP1P53384 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.59■□□□□ 0.25
NUBP1P53384 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NUBP1P53384 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.59■□□□□ 0.25
NUBP1P53384 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NUBP1P53384 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.59■□□□□ 0.25
NUBP1P53384 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC16.59■□□□□ 0.25
NUBP1P53384 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.59■□□□□ 0.25
NUBP1P53384 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.59■□□□□ 0.25
NUBP1P53384 KRT8P13-201ENST00000463294 1010 ntBASIC16.59■□□□□ 0.25
NUBP1P53384 AC108725.1-201ENST00000495472 409 ntBASIC16.59■□□□□ 0.25
NUBP1P53384 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC16.59■□□□□ 0.25
NUBP1P53384 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC16.59■□□□□ 0.25
NUBP1P53384 OR4A19P-201ENST00000533579 1103 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms